Package | Description |
---|---|
htsjdk.samtools.cram.encoding.reader |
Modifier and Type | Class and Description |
---|---|
class |
CramRecordReader |
class |
RefSeqIdReader
A reader that only keeps track of alignment spans.
|
Modifier and Type | Method and Description |
---|---|
AbstractReader |
DataReaderFactory.buildReader(AbstractReader reader,
BitInputStream bitInputStream,
java.util.Map<java.lang.Integer,java.io.InputStream> inputMap,
CompressionHeader header,
int refId) |
Modifier and Type | Method and Description |
---|---|
AbstractReader |
DataReaderFactory.buildReader(AbstractReader reader,
BitInputStream bitInputStream,
java.util.Map<java.lang.Integer,java.io.InputStream> inputMap,
CompressionHeader header,
int refId) |